Supercomputer and Chemistry: IABG Workshop 1989 by U. Harms (auth.), Uwe Harms (eds.) PDF

By U. Harms (auth.), Uwe Harms (eds.)

This quantity represents the contributions of the 1989 IABG workshop on supercomputers and chemistry.

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Limiting factors for conventional SCF calculations are the amount of available mass storage space and the I/O bandwidth. In the direct SCF variant [15,16,17,18] the I/O problem is avoided, as the two electron integrals are evaluated in every SCF cycle. Although the computational effort increases significantly, the method is worthwhile if we use computers with a high computational/I/O performance ratio. The direct approach solely allows the treatment of large molecules. A compromise between these two variants is the semi direct SCF as implemented in the TURBOMOLE package [18].

The maximum link speed amounts to 20 MBit/sec at distances of up to 10 m. A slightly reduced transfer rate is achieved at distances of 10 to 30 m. The basic processing module of a SuperCluster is the MTM-EDC. Four transputers are assembled on each MTM-EDC. Each transputer has a local storage capacity of up to 4 MBytes and several EDC units (Error Detection and Correction units) which at intervals of 4 seconds automatically check the complete storage for bit errors and correct them when necessary.

For example very often small numbers have to be loaded or stored for loops and just as often these four bits are sufficient to address variables relative to the workspace pOinter or to the address contained in register A. Table 1 lists function codes, mnemonics, number of cycles required and the names of these 16 instructions. Two of these 16 direct instructions are special, they are called prefix instructions and provide the ability to generate higher numbers. They always write 4 bits of data into the operand register but carry out no further operations.

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